Enzymes
UniProtKB help_outline | 3 proteins |
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Name help_outline
DNA 5'-phosphate polymer
Identifier
CHEBI:173112
Charge
-1
Formula
(C5H7O5PR)n.H2O
Search links
Involved in 2 reaction(s)
Find proteins in UniProtKB for this molecule
Form(s) in this reaction:
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Identifier: RHEA-COMP:17339Polymer name: DNA(n)Polymerization index help_outline nFormula H2O(C5H7O5PR)nCharge (0)(-1)nMol File for the polymer
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- Name help_outline dZTP Identifier CHEBI:172931 Charge -4 Formula C10H13N6O12P3 InChIKeyhelp_outline JFVJZFMWJVSZNC-KVQBGUIXSA-J SMILEShelp_outline NC1=NC(=NC2=C1N=CN2[C@@H]3O[C@H](COP(=O)(OP(=O)(OP(=O)([O-])[O-])[O-])[O-])[C@@H](O)C3)N 2D coordinates Mol file for the small molecule Search links Involved in 2 reaction(s) Find molecules that contain or resemble this structure Find proteins in UniProtKB for this molecule
- Name help_outline diphosphate Identifier CHEBI:33019 (Beilstein: 185088) help_outline Charge -3 Formula HO7P2 InChIKeyhelp_outline XPPKVPWEQAFLFU-UHFFFAOYSA-K SMILEShelp_outline OP([O-])(=O)OP([O-])([O-])=O 2D coordinates Mol file for the small molecule Search links Involved in 1,129 reaction(s) Find molecules that contain or resemble this structure Find proteins in UniProtKB for this molecule
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Name help_outline
poly(DNA)-2-amino-2'-deoxyadenosine polymer
Identifier
CHEBI:172959
Charge
-2
Formula
(C5H7O5PR)n.C10H14N6O6P
Search links
Involved in 1 reaction(s)
Find proteins in UniProtKB for this molecule
Form(s) in this reaction:
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Identifier: RHEA-COMP:17341Polymer name: DNA(n)-ZPolymerization index help_outline nFormula C10H14N6O6P(C5H7O5PR)nCharge (-1)(-1)nMol File for the polymer
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Cross-references
RHEA:67728 | RHEA:67729 | RHEA:67730 | RHEA:67731 | |
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Reaction direction help_outline | undefined | left-to-right | right-to-left | bidirectional |
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Related reactions help_outline
More general form(s) of this reaction
Publications
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Noncanonical DNA polymerization by aminoadenine-based siphoviruses.
Pezo V., Jaziri F., Bourguignon P.Y., Louis D., Jacobs-Sera D., Rozenski J., Pochet S., Herdewijn P., Hatfull G.F., Kaminski P.A., Marliere P.
Bacteriophage genomes harbor the broadest chemical diversity of nucleobases across all life forms. Certain DNA viruses that infect hosts as diverse as cyanobacteria, proteobacteria, and actinobacteria exhibit wholesale substitution of aminoadenine for adenine, thereby forming three hydrogen bonds ... >> More
Bacteriophage genomes harbor the broadest chemical diversity of nucleobases across all life forms. Certain DNA viruses that infect hosts as diverse as cyanobacteria, proteobacteria, and actinobacteria exhibit wholesale substitution of aminoadenine for adenine, thereby forming three hydrogen bonds with thymine and violating Watson-Crick pairing rules. Aminoadenine-encoded DNA polymerases, homologous to the Klenow fragment of bacterial DNA polymerase I that includes 3'-exonuclease but lacks 5'-exonuclease, were found to preferentially select for aminoadenine instead of adenine in deoxynucleoside triphosphate incorporation templated by thymine. Polymerase genes occur in synteny with genes for a biosynthesis enzyme that produces aminoadenine deoxynucleotides in a wide array of <i>Siphoviridae</i> bacteriophages. Congruent phylogenetic clustering of the polymerases and biosynthesis enzymes suggests that aminoadenine has propagated in DNA alongside adenine since archaic stages of evolution. << Less