Reaction participants Show >> << Hide
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Name help_outline
dolichyl diphosphooligosaccharide
Identifier
CHEBI:57570
Charge
-2
Formula
C36H61N2O17P2R(C5H8)n
Search links
Involved in 15 reaction(s)
Find proteins in UniProtKB for this molecule
Form(s) in this reaction:
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Identifier: RHEA-COMP:19509Polymer name: a di-trans,poly-cis-dolichyl diphosphooligosaccharidePolymerization index help_outline n-1Formula C36H61N2O17P2R(C5H8)n-1Charge (-2)(0)n-1Mol File for the polymer
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Namehelp_outline
L-asparaginyl-[protein]
Identifier
RHEA-COMP:12804
Reactive part
help_outline
- Name help_outline L-asparagine residue Identifier CHEBI:50347 Charge 0 Formula C4H6N2O2 SMILEShelp_outline C([C@@H](C(*)=O)N*)C(N)=O 2D coordinates Mol file for the small molecule Search links Involved in 10 reaction(s) Find molecules that contain or resemble this structure Find proteins in UniProtKB for this molecule
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Name help_outline
dolichyl diphosphate
Identifier
CHEBI:57497
Charge
-3
Formula
C20H35O7P2(C5H8)n
Search links
Involved in 4 reaction(s)
Find proteins in UniProtKB for this molecule
Form(s) in this reaction:
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Identifier: RHEA-COMP:19506Polymer name: a di-trans,poly-cis-dolichyl diphosphatePolymerization index help_outline n-1Formula C20H35O7P2(C5H8)n-1Charge (-3)(0)n-1Mol File for the polymer
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- Name help_outline H+ Identifier CHEBI:15378 Charge 1 Formula H InChIKeyhelp_outline GPRLSGONYQIRFK-UHFFFAOYSA-N SMILEShelp_outline [H+] 2D coordinates Mol file for the small molecule Search links Involved in 9,431 reaction(s) Find molecules that contain or resemble this structure Find proteins in UniProtKB for this molecule
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Namehelp_outline
N4-(oligosaccharide-(1→4)-N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-β-D-glucosaminyl)-L-asparaginy-[protein]
Identifier
RHEA-COMP:12805
Reactive part
help_outline
- Name help_outline an N4-(oligosaccharide-(1→4)-N-acetyl-β-D-glucosaminyl-(1→4)-N-acetyl-β-D-glucosaminyl)-L-asparagine residue Identifier CHEBI:132529 Charge 0 Formula C20H31N4O12R SMILEShelp_outline N([C@@H]1O[C@@H]([C@H]([C@@H]([C@H]1NC(=O)C)O)O[C@@H]2O[C@@H]([C@H]([C@@H]([C@H]2NC(=O)C)O)O*)CO)CO)C(C[C@@H](C(*)=O)N*)=O 2D coordinates Mol file for the small molecule Search links Involved in 11 reaction(s) Find molecules that contain or resemble this structure Find proteins in UniProtKB for this molecule
Cross-references
RHEA:22980 | RHEA:22981 | RHEA:22982 | RHEA:22983 | |
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Reaction direction help_outline | undefined | left-to-right | right-to-left | bidirectional |
UniProtKB help_outline |
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EC numbers help_outline | ||||
Gene Ontology help_outline | ||||
KEGG help_outline | ||||
MetaCyc help_outline |
Related reactions help_outline
Specific form(s) of this reaction
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RHEA:50351
a α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphospho-di-trans,poly-cis-dolichol + L-asparaginyl-[protein] <=> a di-trans,poly-cis-dolichyl diphosphate + H+ + N4-(α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-β-D-GlcNAc)-L-asparaginyl-[protein]
Publications
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N-glycoproteomics in plants: perspectives and challenges.
Song W., Henquet M.G., Mentink R.A., van Dijk A.J., Cordewener J.H., Bosch D., America A.H., van der Krol A.R.
In eukaryotes, proteins that are secreted into the ER are mostly modified by N-glycans on consensus NxS/T sites. The N-linked glycan subsequently undergoes varying degrees of processing by enzymes which are spatially distributed over the ER and the Golgi apparatus. The post-ER N-glycan processing ... >> More
In eukaryotes, proteins that are secreted into the ER are mostly modified by N-glycans on consensus NxS/T sites. The N-linked glycan subsequently undergoes varying degrees of processing by enzymes which are spatially distributed over the ER and the Golgi apparatus. The post-ER N-glycan processing to complex glycans differs between animals and plants, with consequences for N-glycan and glycopeptide isolation and characterization of plant glycoproteins. Here we describe some recent developments in plant glycoproteomics and illustrate how general and plant specific technologies may be used to address different important biological questions. << Less
J Proteomics 74:1463-1474(2011) [PubMed] [EuropePMC]
This publication is cited by 1 other entry.
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Dolichyldiphosphoryloligosaccharide--protein oligosaccharyltransferase; solubilization, purification, and properties.
Das R.C., Heath E.C.
Dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase was solubilized from hen oviduct rough endoplasmic reticulum by extraction with 0.2% Nonidet P40. Oligosaccharyltransferase activity was assayed in an incubation mixture containing Glc(n)-Man(x)-GlcNAc(2)-diphosphoryldolichol as ... >> More
Dolichyldiphosphoryloligosaccharide-protein oligosaccharyltransferase was solubilized from hen oviduct rough endoplasmic reticulum by extraction with 0.2% Nonidet P40. Oligosaccharyltransferase activity was assayed in an incubation mixture containing Glc(n)-Man(x)-GlcNAc(2)-diphosphoryldolichol as an oligosaccharyl donor and the (125)I-labeled tryptic peptide consisting of residues 29-58 from bovine alpha-lactalbumin as acceptor. The transferase was purified approximately 2000-fold by fractionation on a bovine alpha-lactalbumin-Sepharose column; the active material bound quantitatively to the gel and was eluted by removal of divalent cation from the wash buffer. The product of the transferase activity, (125)I-glycopeptide, was determined as concanavalin A-agarose-adsorbed radioactivity by a filter disc assay method. (125)I-Labeled concanavalin A-agarose-bound product was characterized as a glycopeptide as follows: (i) gel filtration behavior on Sephadex G-50; (ii) elution from concanavalin A-agarose with 1% alpha-methyl mannoside; (iii) absence of affinity for ricin-Sepharose and loss of affinity for concanavalin A-agarose after treatment with endo-beta-N-acetylglucosaminidase H; (iv) enzymatic synthesis of identical product upon using [(3)H]oligosaccharyldiphosphoryldolichol and unlabeled peptide acceptor; and (v) digestion of (3)H-labeled peptide with Pronase, resulting in the formation of lower molecular weight glycopeptide. Oligosaccharyltransferase activity exhibited an absolute requirement for divalent cations (3 mM Mn(2+); Mg(2+) was 30% as effective), complete dependence on exogenously supplied peptide acceptor (1.33 mug/ml) and oligosaccharyldiphosphoryldolichol (approximately 10 nmol/ml), and an optimum pH between 7 and 7.5. << Less
Proc Natl Acad Sci U S A 77:3811-3815(1980) [PubMed] [EuropePMC]
This publication is cited by 1 other entry.